Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015870385.1_cds_XP_016434069.1_30164
CDS Infomation

[gene=LOC107760523] [db_xref=GeneID:107760523] [protein=pentatricopeptide repeat-containing protein At5g46100-like] [protein_id=XP_016434069.1] [location=complement(8053..9492)] [gbkey=CDS]
Sequence

ATGAGCAGCAAGTTAGCAATCAAATGGCCTAGAAAAGTCACGACAACCCTTGTCGAACAA
CTGATTCGAGCAGAAAAAGATGTACAAAAAGCTGTTCTTATATTTGACGCAGCAACAGCA
GAGTACTCTAATGGCTTCCGGCATGATCGTAGCACATTTGGTCTCATCATCTCTAGATTG
CTTTCTGCAAATCATTTCAATCTAGCGGAGGAAATGCTTGTCAGAATGAAGGGCGAGAGC
TGTAAAATTACTGAGGATATATTCCTCTCAATCTATAGAGCCTATGGGCGGGTTCACAAG
CCACTCGAGGTGATCAGGGTTTTCCAAAAGATGAAGGAATATGATTGTGAGCCAACGCAA
AAGTCGTATATTACGGTGTTCTCTGTACTTGTTGATGAAAACCGGTTAAAAACTGCTTTT
AGGTTTTATCGTTACATGAGGGGGATGGGCATTCCACCTTGTGTTGCTTCGCTTAATATT
TTGATTAAAGCTCTCTGCAAGAACAGTGGAACAATAGGTTCTGCTTTTCGTATATTCCGT
GAGATGCCGAATCGCGGATTTACACCGGATTCCTATACATATGGGACTCTAATTAATGGG
CTTTGCAAATTGGGCAAGGCCACTGAAGCAAAAGAACTTCTGACGGAGATGGAAGCAAAT
GGTTGTTCCCCTACTGTAGTCACCTATACTTGTTTGATTCATGGATTTTGCCAGTCAAAT
AACTTGGATGAAGCCATGGGATTGCTTGAGGACATGAGGAGCAAAGGTATTGAGCCCAAT
GTGTTCACTTATAGTTCTTTGATGGACGGTCTGTGTAAGGGTGGACGTTCTTCTCATGCA
ATGGAGCTATTGGAGATAATGATTCATGAACATAAGGTTCCAAATATGATAACTTACAGT
TCCTTAATTCACGGACTTTGTGGAGAAGGTAAAATTGGAGAAGCCTTAGAGGTTTTCGAC
AGAATGAAAATTCAGGGATGTAAACCTGATGCCGGGTTATACTGGAAAGTTATCAATGGC
TTTTGTGAGAATAACAAGTTTCAAGAAGCAGCCAACTATCTTGATGAAATGATTCTTAGT
GGAATATCTCCAAACCGATTAACTTGGAGCTTGCATGTGAAGATCCATAATGCAGTAGTC
CAAGGCCTGTGTGCCGTGAATGATCCAAATCGAGCTTTTCAATTATATCTAAGCATGCGC
ACCCGAGCCATCTCAGTTGAGGACAAGTCTTTTGAGATTCTGGTCAACCATTTCTGCAAG
AAAGGAGACGTGCACAAGGCTGCTCGTATTGTCGAGGAAATGTTGATTGATGGAAGCATT
CCAGATGAACAAACATGGGCGGTTGTGGTGGGTGGATTTTGGGATAGAAGGAAGGTAAGG
GAAGCAGCTGATTCGGTACAGGCTGCCCTGATGTATAAACGTATGGATTTTGGATCTTGA

Peptide Sequence

PEP ID

XP_016434069.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At5g46100-like [Nicotiana tabacum]
Sequence

MSSKLAIKWPRKVTTTLVEQLIRAEKDVQKAVLIFDAATAEYSNGFRHDRSTFGLIISRL
LSANHFNLAEEMLVRMKGESCKITEDIFLSIYRAYGRVHKPLEVIRVFQKMKEYDCEPTQ
KSYITVFSVLVDENRLKTAFRFYRYMRGMGIPPCVASLNILIKALCKNSGTIGSAFRIFR
EMPNRGFTPDSYTYGTLINGLCKLGKATEAKELLTEMEANGCSPTVVTYTCLIHGFCQSN
NLDEAMGLLEDMRSKGIEPNVFTYSSLMDGLCKGGRSSHAMELLEIMIHEHKVPNMITYS
SLIHGLCGEGKIGEALEVFDRMKIQGCKPDAGLYWKVINGFCENNKFQEAANYLDEMILS
GISPNRLTWSLHVKIHNAVVQGLCAVNDPNRAFQLYLSMRTRAISVEDKSFEILVNHFCK
KGDVHKAARIVEEMLIDGSIPDEQTWAVVVGGFWDRRKVREAADSVQAALMYKRMDFGS

Transcript Sequence

Gene sequence data has not been registered.